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INTERMEDIATE LEVEL

Tell me about a time when you had to implement new methodologies or techniques for protein engineering.

Protein Engineering Scientist Interview Questions
Tell me about a time when you had to implement new methodologies or techniques for protein engineering.

Sample answer to the question

During my time as a Protein Engineering Scientist at my previous company, I had the opportunity to implement new methodologies and techniques for protein engineering. One specific instance was when we were working on developing a novel protein with enhanced function for a medical application. I noticed that our current methods were not yielding the desired results, so I decided to explore new approaches. I researched various literature and consulted with experts in the field to gather insights and ideas. After careful evaluation, I introduced a new computational modeling software that allowed us to predict and optimize protein structures more efficiently. I also implemented a novel experimental protocol that involved using a different protein expression system. These changes significantly improved our success rate in generating proteins with the desired properties, and we were able to progress our project to the next phase.

A more solid answer

As a Protein Engineering Scientist at my previous company, I had the opportunity to implement new methodologies and techniques for protein engineering on multiple occasions. One notable example was when we were tasked with developing a novel protein with enhanced stability and catalytic activity for an industrial application. After thorough research and consultation with experts, I identified a gap in our current methods and decided to explore computational protein design tools to improve our success rate. I used software like Rosetta and Foldit to model and simulate protein structures, allowing us to predict and optimize the properties we were targeting. Additionally, I devised a novel experimental protocol involving a high-throughput protein expression system that enabled us to rapidly generate and screen a large panel of protein variants. The implementation of these new methodologies not only resulted in the successful identification of several highly stable and active proteins but also significantly reduced the overall project timeline by six months.

Why this is a more solid answer:

The solid answer expands on the basic answer by providing more specific details about the candidate's experience with protein engineering. It highlights the candidate's ability to research and consult with experts, as well as their knowledge of computational biology and protein modeling software. The answer also emphasizes the impact of the implemented methodologies, mentioning improved success rates, reduced project timelines, and the generation of desirable protein variants. However, there is still room for improvement in terms of providing more specific examples and elaborating on the candidate's problem-solving skills.

An exceptional answer

During my tenure as a Protein Engineering Scientist, I proactively sought opportunities to implement innovative methodologies and techniques to advance protein engineering in my team. One instance that stands out was when we were working on developing a thermostable enzyme for a biotechnology project. Recognizing the limitations of traditional protein engineering approaches, I spearheaded the adoption of a cutting-edge directed evolution strategy called DNA family shuffling. This technique involved the creation of diverse chimeric gene libraries by recombining homologous genes from different organism sources. To navigate the complex experimental design and analysis involved in this methodology, I leveraged my computational biology skills to develop custom scripts and algorithms that facilitated library construction, screening, and optimization. The integration of DNA family shuffling and computational tools enabled us to identify highly thermostable enzyme variants with improved catalytic activity, a feat that had not been accomplished previously in our team. Our success garnered attention within the organization, and we were able to secure additional funding for similar projects based on this innovative approach.

Why this is an exceptional answer:

The exceptional answer provides a detailed and specific example of the candidate's experience implementing new methodologies and techniques for protein engineering. It showcases the candidate's proactive approach and their ability to identify limitations in existing methods. The answer emphasizes the candidate's knowledge of advanced techniques such as DNA family shuffling and their proficiency in computational biology. It also highlights the impact of the implemented methodologies, mentioning the successful generation of thermostable enzyme variants with improved catalytic activity. Additionally, the answer demonstrates the candidate's ability to leverage their expertise for organizational recognition and securing further funding. The candidate could further improve the answer by discussing any challenges faced during the implementation and how they were overcome.

How to prepare for this question

  • Familiarize yourself with different protein engineering methodologies and their applications.
  • Stay up-to-date with the latest advancements in computational biology and protein modeling software.
  • Practice describing specific instances where you have implemented new methodologies or techniques for protein engineering, highlighting the impact and outcomes.
  • Highlight your problem-solving and analytical skills, showcasing your ability to research, evaluate, and implement innovative approaches.
  • Prepare examples where you have successfully collaborated with interdisciplinary teams to implement new methodologies.
  • Consider discussing any challenges faced during the implementation process and how you overcame them.

What interviewers are evaluating

  • Experience with protein engineering
  • Ability to implement new methodologies
  • Knowledge of computational biology and protein modeling software

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