/Protein Engineering Scientist/ Interview Questions
SENIOR LEVEL

What protein expression systems are you familiar with and what techniques have you used for protein purification?

Protein Engineering Scientist Interview Questions
What protein expression systems are you familiar with and what techniques have you used for protein purification?

Sample answer to the question

I am familiar with bacterial, yeast, and mammalian protein expression systems. In terms of protein purification techniques, I have experience with affinity chromatography, ion-exchange chromatography, and size-exclusion chromatography. These techniques have allowed me to purify proteins with high yield, purity, and activity. I have also used techniques such as ultracentrifugation and dialysis for further purification and concentration of proteins. With my knowledge and experience in protein expression systems and purification techniques, I am confident in my ability to contribute to the protein engineering efforts of your team.

A more solid answer

I have extensive experience with bacterial, yeast, and mammalian protein expression systems. For bacterial expression, I have successfully expressed and purified recombinant proteins using E. coli-based systems. This involved optimizing expression conditions, such as inducer concentration and temperature, to achieve high protein yields. In yeast expression, I have utilized Saccharomyces cerevisiae as a platform for producing complex proteins with post-translational modifications. For mammalian expression, I have used various cell lines, including HEK293 and CHO cells, to express therapeutic proteins. Regarding protein purification, I have employed techniques such as affinity chromatography, where I have utilized His-tag purification systems to isolate His-tagged proteins with high purity and yield. I have also used ion-exchange chromatography and size-exclusion chromatography for further purification. In addition, I have applied techniques like ultracentrifugation and dialysis to concentrate and purify proteins. My experience and expertise in protein expression systems and purification techniques make me a strong fit for this role.

Why this is a more solid answer:

The solid answer provides specific examples of the candidate's experience and accomplishments in protein expression systems and purification techniques. It highlights the candidate's success in optimizing expression conditions for bacterial systems, utilizing yeast for producing complex proteins, and using various mammalian cell lines. The answer also mentions the candidate's proficiency in different purification techniques and their application for protein purification. However, the answer could benefit from including more details about the candidate's achievements and the outcomes of their work.

An exceptional answer

I have a breadth of experience with different protein expression systems, including bacterial, yeast, and mammalian systems. In bacterial expression, I have engineered and expressed recombinant proteins in E. coli, optimizing expression conditions to achieve high protein yields and simplify downstream purification. For yeast expression, I have used S. cerevisiae to produce difficult-to-express proteins, including membrane proteins and multi-domain proteins, overcoming challenges associated with protein folding and post-translational modifications. In mammalian expression, I have successfully generated recombinant proteins in HEK293 and CHO cells, ensuring proper protein folding and glycosylation. In terms of protein purification, I have employed a range of techniques tailored to the specific protein of interest. For example, I have utilized affinity chromatography with various tags, such as His-tag and Strep-tag, to achieve high purity and yield. I have also employed ion-exchange chromatography, size-exclusion chromatography, and hydrophobic interaction chromatography to further purify proteins. Additionally, I have experience in using advanced techniques such as liquid chromatography-mass spectrometry (LC-MS) for characterization and quality control of purified proteins. Through my extensive experience and expertise, I have successfully purified proteins for downstream applications in therapeutics and biophysical studies.

Why this is an exceptional answer:

The exceptional answer provides a detailed account of the candidate's experience and achievements in protein expression systems and purification techniques. It highlights the candidate's expertise in optimizing expression conditions for bacterial, yeast, and mammalian systems and describes their success in producing challenging proteins in each system. The answer also mentions the candidate's proficiency in a variety of purification techniques and includes the use of advanced techniques such as LC-MS for protein characterization. The exceptional answer demonstrates the candidate's deep knowledge and strong track record in protein expression and purification.

How to prepare for this question

  • Familiarize yourself with different protein expression systems such as bacterial, yeast, and mammalian systems. Understand the benefits and limitations of each system.
  • Learn about various protein purification techniques, including affinity chromatography, ion-exchange chromatography, and size-exclusion chromatography. Understand the principles behind each technique and the factors that impact protein purification efficiency.
  • Be prepared to discuss specific examples of your experience with protein expression systems and purification techniques. Highlight any challenges you have overcome and the outcomes of your work.
  • Stay up-to-date with the latest advancements in protein expression and purification technologies. Read scientific literature, attend conferences, and engage in discussions with experts in the field.

What interviewers are evaluating

  • Protein expression systems
  • Protein purification techniques

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